¡Bienvenidos a Peru! It seems like yesterday my flight
arrived in Peru and the international research adventure
began. It was the University of Arizona BRAVO! program
that presented me the chance to visit Lima,
Peru to
do international research with the Universidad
Peruana Cayetano Heredia (UPCH) in conjunction with Johns
Hopkins School of Public Health. Three full months of studying
tapeworms in one of the most historical of Latin American
countries was definitely going to be an experience.
Peru is your basic parasite repository. If you are
looking for a parasite, Peru likely has it. It probably
falls right behind Africa, the mecca of all parasite
reservoirs. Just ask fiftypercent of the students who
went to Peru. Those fifty percent will tell you those
parasites are out there and they are looking for a
host like you. One really does not have look much farther
than the water source. You can find pretty much everything
from your basic bacteria to hookworms to Cyclospora
cayetanensis, named after none other
than the Universidad Cayetano. For this reason, Peru
was the perfect site
for me to do research on Taenia solium, a tapeworm
spread via unsanitary measures and improper pork consumption.
Studying the parasite was a bit intimidating to me
at first. Even though I had become very familiar with
the T. solium’s lifecycle, routes of transmission,
resultant diseases, and treatments, I still felt like
a novice. My actual hands-on experience with the parasite
was non-existent. My two mentors reconfirmed my suspicions
that I was indeed green with regard to this beautiful
specimen. They really knew so much more about the parasite,
having worked on it for several years. When Dr.
Robert Gilman and Holger Mayta, a PhD student, took me under
their wings and assisted me with my project, the whole
picture started to make a lot more sense. Sure I knew
why I had come to study this parasite, but the implications
of the study really had not hit me until I saw what
was happening down there. The study was a big collaboration
of data that amounted to one nice attempt at eradicating
sources of T. solium in the Peruvian population.
My project was an examination of different primer sequences
within the Tso31 and Tso22 genes suspected to be involved
in oncosphere attachment to intestinal tissue. “Molecular
Tools for Diagnosing Taenia solium” was a project
set up to diagnose T. solium via DNA isolation of the
species in stool, independent of all other species
in close relation (i.e. Taenia saginata, Hymenolepsis
nana, Echinococcus granulosis, and Ascaris
spp.). A
few different ways of taeniasis diagnosis already exist,
such as PCR restriction fragment length polymorphism
assay (RFLP) and ELISA, but PCR solely for the diagnosis
of T. solium, however, had yet to be performed via
shed eggs in stool.
Once I began collecting samples, isolating DNA, and
performing PCR, I started to see the difference in
laboratory practices compared to the states. Universities
in Peru are definitely not like your average Tier I
universities in the US. Research was definitely different.
Everything was reusable; almost nothing was expendable.
Research grant money never seemed to have so much value.
Immediately, I found it a bit difficult to adjust having
learned stringent techniques to ensure the pristine,
cleanliness of my products. A tip was a tip in the
states, but a tip lost in Peru was money lost towards
someone’s salary. Even paper towels of nominal
value were used sparingly.
Regardless of frugality at UPCH, I was still able to
obtain results. Two of the designed primers from the
Tso31 gene showed promise for diagnosing T. solium in stool, even with very little DNA present. Specific
PCR bands at around 227 base pairs for primers Tso31-F1
and Tso31-R6 showed nearly 100% accuracy with isolated
DNA from stool using the Fast DNA kit (QBiogene) and
the optimized PCR master mix. Tso31-F1 and Tso31-R1
primers showed about 50% variability between having
one band or two bands. The second band was probably
a result of primer sequences amplifying normal flora
bacteria found in Peruvians or human DNA found in the
stool. Since the primers did not amplify anything but
the suspected 451 base pair T. solium strand from pure
isolated DNA from T. solium proglottids it is likely
that this primer set would not function well for diagnosis
in stool (as indicated by the second band). The Tso22
primers also did not show promise for diagnosis of
T. solium, although they did show uniqueness for isolating
T. saginata. The next focus was to look for a multiplex
that could distinguish whether the Taenia spp. eggs
were T. solium or T. saginata (since eggs are indistinguishable
via microscopy). Additionally, a new focus was directed
towards determining if PCR was effective using copro
positive samples (samples positive for taeniasis via
ELISA antigen/antibody testing uncoupled from presence
of eggs). Some research was performed, but the results
were inconclusive due to the storage materials’ inhibitory
effect on PCR. A continued study on the copro positive
sampling using this PCR mix is underway. Further results
and analysis are currently being conducted before attempting
to put in for publication. The results of this study
are extremely important with regard to accurately diagnosing
possible taeniasis patients and removing sources of
taeniasis by correct treatment to prevent population
outbreak.
Many of the results of the BRAVO! experience, be it
lab results or life in general, have been positive
for me. Visiting the country of Peru could not have
been more perfect. It truly gave me a chance to reflect
on who I was. Perhaps the fact that Peru is a developing
country allowed me to gain new perspectives on many
of the world issues today, and to truly see how good
we have it in the US. It also gave me a chance to sincerely
appreciate world history. It is hard to grasp the magnificence
of Machu Picchu until you see it face to face, or appreciate
the vast impact of the Spanish conquest in all of Peru.
History is written all over that country, even in the
faces of the people. I was even fortunate enough to
see other cultures besides that of Peru such as Argentine
or Uruguayan. It is through seeing other cultures that
you begin to appreciate your own.
There is no doubt that leaving your country and your
home is a difficult task. It is even difficult running
your own project and troubleshooting with people who
may or may not speak your native language. In spite
of difficulties, the experience is well worth it. The
people I have met along the way have been great networking
partners and great friends. My laboratory knowledge
has increased several fold. Moreover, the experience
has helped me to learn to adapt, have patience, and
become more culturally aware.
I would like to give a big thank you to the BRAVO!
program at the University of Arizona, Universidad
Peruana Cayetano Heredia, the NIH, and Johns Hopkins
School
of Public Health for supporting my research endeavors
abroad. I would also like to extend a special thank
you to those who advised and supported me throughout
my stay in Peru: Dr. Charles Sterling, Dr.
Robert Gilman, Holger Mayta, Carmen Taquiri, and Hugo
Garcia. Finally,
a huge show of appreciation should go out to Carol
Bender and others with the BRAVO! program for making
top-notch research experiences for undergraduate’s
possible. Thank you all for helping me to have one
of the best international experiences a person could
ask for.
Emily Prendergast, BRAVO! student in Dr.
Sterling’s
Immunoparasitology lab at the University of Arizona